BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009F02SP1|AL426063
(811 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1152 1585 0.0
>3x_Contig1152
Length = 5366
Score = 1585 bits (799), Expect = 0.0
Identities = 807/809 (99%), Gaps = 1/809 (0%)
Strand = Plus / Plus
Query: 3 atccgttgagttatgggccgtctcataaagaactttcaaattgttatgataattagggtt 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 atccgttgagttatgggccgtctcataaagaactttcaaattgttatgataattagggtt 1143
Query: 63 gtacttggcatgattttcatctactggaataacgaaatcaaacctcaatgcgtccactat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1144 gtacttggcatgattttcatctactggaataacgaaatcaaacctcaatgcgtccactat 1203
Query: 123 tagtaaaaccatcttatcgtatttagcttcgaagggaagctggggatcaagttctgcaac 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 tagtaaaaccatcttatcgtatttagcttcgaagggaagctggggatcaagttctgcaac 1263
Query: 183 gttatccaacaccgtccttgttaaaaggaacccttttgcgaaaaatgctatggaaataaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1264 gttatccaacaccgtccttgttaaaaggaacccttttgcgaaaaatgctatggaaataaa 1323
Query: 243 ctgcaatacagccaaagaagcaagtmatagtatgtacagagtgtgcgtagacttgaacct 302
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1324 ctgcaatacagccaaagaagcaagtaatagtatgtacagagtgtgcgtagacttgaacct 1383
Query: 303 tgatatccgatagctcattcgactggacctcgtttgaggccccattatgctgagtctaat 362
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1384 tgatatccgatagctcattcgactggacctcgtttgaggccc-attatgctgagtctaat 1442
Query: 363 tctctctgcccgatctcgttcatcactaacagtgggattcatcacttcttaccagtttcc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1443 tctctctgcccgatctcgttcatcactaacagtgggattcatcacttcttaccagtttcc 1502
Query: 423 aaacgggacaaaaacacaactaaacgaaagtacaataaattcacgttgaataatgatatt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1503 aaacgggacaaaaacacaactaaacgaaagtacaataaattcacgttgaataatgatatt 1562
Query: 483 gtgcagaagaattgagtcacactggcgaaagtggttcgcttatctctcgcctctgacaga 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1563 gtgcagaagaattgagtcacactggcgaaagtggttcgcttatctctcgcctctgacaga 1622
Query: 543 gttcttgttaccactttatttcattttaaaggttaatttcttttaaaacagaacaattgt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1623 gttcttgttaccactttatttcattttaaaggttaatttcttttaaaacagaacaattgt 1682
Query: 603 acatcacgtgatcattgttccctcttcaaataatgcaactccaattctgatcggcgaaga 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1683 acatcacgtgatcattgttccctcttcaaataatgcaactccaattctgatcggcgaaga 1742
Query: 663 tactgaccattgagctgagtggatccatggtattatcaacggtggcaagggctcattaga 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1743 tactgaccattgagctgagtggatccatggtattatcaacggtggcaagggctcattaga 1802
Query: 723 accttgtttatttcaatttgttctgttttcttctttaggaaatgtaactatgtaaccaaa 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1803 accttgtttatttcaatttgttctgttttcttctttaggaaatgtaactatgtaaccaaa 1862
Query: 783 aatgtgtaaaatcttaacgagtttcactt 811
|||||||||||||||||||||||||||||
Sbjct: 1863 aatgtgtaaaatcttaacgagtttcactt 1891
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6295
Number of Sequences: 1807
Number of extensions: 6295
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 811
length of database: 10,358,551
effective HSP length: 16
effective length of query: 795
effective length of database: 10,329,639
effective search space: 8212063005
effective search space used: 8212063005
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)